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Pseudobulk cell CNA profiles

Source: R/utils.R
pseudobulk_sce.Rd

Pseudobulk cell CNA profiles

Usage

pseudobulk_sce(sce, assay_name, group_var = "all", statistics = "mean")

Arguments

sce

SingleCellExperiment Object

assay_name

Name of the assay

group_var

Grouping variable to pseudobulk across. Default: "all"

statistics

Character vector specifying the type of statistics to be computed, see scuttle::summarizeAssayByGroup.

Value

SingleCellExperiment object