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Plot Cell Copy Number

Source: R/plotting.R
plot_cell_cna.Rd

Plot Cell Copy Number

Usage

plot_cell_cna(
  sce,
  cell_id = NULL,
  assay_name = "counts",
  col_fun = NULL,
  linewidth = 1
)

Arguments

sce

sce object

cell_id

Vector of cell ids

assay_name

Name of assay to plot

col_fun

Color mapping function from circlize::colorRamp2()

linewidth

Width of the line segments in plot

Value

A ggplot object