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Merge segment levels

Usage

merge_segments(
  sce,
  smooth_assay,
  segment_assay,
  new_assay = "segment_merged",
  bpparam = bpparam
)

Arguments

sce

A SingleCellExperiment object

smooth_assay

name of assay with smoothed counts

segment_assay

name of assay with segmented counts

new_assay

Name of the new assay

bpparam

BiocParallel Parameters

Value

A SingleCellExperiment object